Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT3P12035 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT3P12035 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
KRT3P12035 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT3P12035 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT3P12035 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
KRT3P12035 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT3P12035 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.65■□□□□ 0.74
KRT3P12035 MCCD1P1-208ENST00000445732 328 ntBASIC19.65■□□□□ 0.74
KRT3P12035 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT3P12035 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT3P12035 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
KRT3P12035 AL023803.3-201ENST00000615559 522 ntBASIC19.65■□□□□ 0.74
KRT3P12035 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
KRT3P12035 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT3P12035 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT3P12035 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT3P12035 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT3P12035 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT3P12035 AC090164.3-201ENST00000610780 2143 ntBASIC19.64■□□□□ 0.74
KRT3P12035 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT3P12035 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT3P12035 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
KRT3P12035 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.64■□□□□ 0.73
KRT3P12035 AL596275.1-201ENST00000423464 877 ntBASIC19.64■□□□□ 0.73
KRT3P12035 TSPY17P-201ENST00000450329 467 ntBASIC19.64■□□□□ 0.73
KRT3P12035 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT3P12035 AL353719.1-201ENST00000566847 864 ntBASIC19.64■□□□□ 0.73
KRT3P12035 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.64■□□□□ 0.73
KRT3P12035 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.64■□□□□ 0.73
KRT3P12035 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT3P12035 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT3P12035 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 AC126763.1-201ENST00000552015 2118 ntBASIC19.64■□□□□ 0.73
KRT3P12035 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
KRT3P12035 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT3P12035 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT3P12035 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT3P12035 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.63■□□□□ 0.73
KRT3P12035 CCR12P-201ENST00000446203 998 ntBASIC19.63■□□□□ 0.73
KRT3P12035 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT3P12035 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT3P12035 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT3P12035 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT3P12035 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT3P12035 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KRT3P12035 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT3P12035 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT3P12035 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT3P12035 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.62■□□□□ 0.73
KRT3P12035 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT3P12035 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 C2orf69P3-201ENST00000565542 1120 ntBASIC19.62■□□□□ 0.73
KRT3P12035 MYC-208ENST00000641036 567 ntBASIC19.62■□□□□ 0.73
KRT3P12035 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT3P12035 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT3P12035 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.62■□□□□ 0.73
KRT3P12035 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms