Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.04■□□□□ 0.48
LINGO3P0C6S8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 AC008687.6-201ENST00000596318 630 ntBASIC18.04■□□□□ 0.48
LINGO3P0C6S8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 AC120498.8-201ENST00000614275 531 ntBASIC18.04■□□□□ 0.48
LINGO3P0C6S8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINGO3P0C6S8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 AP003097.1-201ENST00000530657 1135 ntBASIC18.03■□□□□ 0.48
LINGO3P0C6S8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 AC116351.2-201ENST00000606540 1585 ntBASIC18.03■□□□□ 0.48
LINGO3P0C6S8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINGO3P0C6S8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 AC026366.1-201ENST00000488803 879 ntBASIC18.02■□□□□ 0.48
LINGO3P0C6S8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 MIR4651-201ENST00000582622 73 ntBASIC18.02■□□□□ 0.48
LINGO3P0C6S8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.02■□□□□ 0.48
LINGO3P0C6S8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LINGO3P0C6S8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINGO3P0C6S8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LINGO3P0C6S8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
LINGO3P0C6S8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINGO3P0C6S8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
LINGO3P0C6S8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINGO3P0C6S8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms