Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 RCC2P3-201ENST00000418112 1537 ntBASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 HOXB1-202ENST00000577092 1414 ntBASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 HLA-F-220ENST00000434407 884 ntBASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB40ALP0C0E4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 AL157888.1-201ENST00000631930 593 ntBASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 KRT8P32-201ENST00000512863 1461 ntBASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB40ALP0C0E4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 MIR564-202ENST00000385049 94 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 KRT18P23-201ENST00000435622 1283 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 AC104390.1-201ENST00000555663 520 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 AC011498.5-201ENST00000592027 486 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 AL121672.3-201ENST00000608644 468 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 NPAP1P7-201ENST00000613027 823 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms