Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.51■□□□□ 0.07
CTSDP07339 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CTSDP07339 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CTSDP07339 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTSDP07339 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.51■□□□□ 0.07
CTSDP07339 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.5■□□□□ 0.07
CTSDP07339 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CTSDP07339 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CTSDP07339 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.5■□□□□ 0.07
CTSDP07339 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.5■□□□□ 0.07
CTSDP07339 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.5■□□□□ 0.07
CTSDP07339 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.5■□□□□ 0.07
CTSDP07339 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 KRT8P45-201ENST00000414328 1447 ntBASIC15.5■□□□□ 0.07
CTSDP07339 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CTSDP07339 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CTSDP07339 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTSDP07339 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CTSDP07339 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
CTSDP07339 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 AC139713.2-201ENST00000641328 2723 ntBASIC15.49■□□□□ 0.07
CTSDP07339 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.49■□□□□ 0.07
CTSDP07339 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CTSDP07339 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTSDP07339 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CTSDP07339 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CTSDP07339 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CTSDP07339 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.48■□□□□ 0.07
CTSDP07339 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.48■□□□□ 0.07
CTSDP07339 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 KRT8P32-201ENST00000512863 1461 ntBASIC15.48■□□□□ 0.07
CTSDP07339 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.48■□□□□ 0.07
CTSDP07339 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms