Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM3P06753 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.92■□□□□ 0.94
TPM3P06753 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM3P06753 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.92■□□□□ 0.94
TPM3P06753 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
TPM3P06753 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM3P06753 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TPM3P06753 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TPM3P06753 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 AC141586.5-201ENST00000624546 2050 ntBASIC20.92■□□□□ 0.94
TPM3P06753 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM3P06753 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
TPM3P06753 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
TPM3P06753 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TPM3P06753 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.91■□□□□ 0.94
TPM3P06753 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.91■□□□□ 0.94
TPM3P06753 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.91■□□□□ 0.94
TPM3P06753 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.91■□□□□ 0.94
TPM3P06753 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TPM3P06753 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.91■□□□□ 0.94
TPM3P06753 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TPM3P06753 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TPM3P06753 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM3P06753 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.91■□□□□ 0.94
TPM3P06753 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.91■□□□□ 0.94
TPM3P06753 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 AC012317.2-201ENST00000623305 2251 ntBASIC20.9■□□□□ 0.94
TPM3P06753 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM3P06753 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TPM3P06753 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM3P06753 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TPM3P06753 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 AC004911.1-201ENST00000416316 871 ntBASIC20.9■□□□□ 0.94
TPM3P06753 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM3P06753 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM3P06753 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM3P06753 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TPM3P06753 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM3P06753 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TPM3P06753 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TPM3P06753 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.89■□□□□ 0.94
TPM3P06753 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TPM3P06753 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM3P06753 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM3P06753 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TPM3P06753 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.89■□□□□ 0.93
TPM3P06753 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 DUSP5P2-201ENST00000426873 1033 ntBASIC20.89■□□□□ 0.93
TPM3P06753 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM3P06753 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM3P06753 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.89■□□□□ 0.93
TPM3P06753 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM3P06753 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM3P06753 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TPM3P06753 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM3P06753 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TPM3P06753 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.88■□□□□ 0.93
TPM3P06753 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
TPM3P06753 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms