Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCATP04180 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.33■□□□□ 0.2
LCATP04180 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.33■□□□□ 0.2
LCATP04180 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.33■□□□□ 0.2
LCATP04180 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.33■□□□□ 0.2
LCATP04180 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
LCATP04180 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.33■□□□□ 0.2
LCATP04180 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LCATP04180 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCATP04180 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCATP04180 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.33■□□□□ 0.2
LCATP04180 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCATP04180 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.33■□□□□ 0.2
LCATP04180 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.33■□□□□ 0.2
LCATP04180 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.33■□□□□ 0.2
LCATP04180 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LCATP04180 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LCATP04180 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCATP04180 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
LCATP04180 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.32■□□□□ 0.2
LCATP04180 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 CRYGFP-201ENST00000418459 633 ntBASIC16.32■□□□□ 0.2
LCATP04180 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.32■□□□□ 0.2
LCATP04180 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
LCATP04180 KRT8P32-201ENST00000512863 1461 ntBASIC16.32■□□□□ 0.2
LCATP04180 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.32■□□□□ 0.2
LCATP04180 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.32■□□□□ 0.2
LCATP04180 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCATP04180 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.32■□□□□ 0.2
LCATP04180 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.31■□□□□ 0.2
LCATP04180 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.31■□□□□ 0.2
LCATP04180 AC096733.2-201ENST00000609937 1394 ntBASIC16.31■□□□□ 0.2
LCATP04180 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 AP003071.4-201ENST00000562276 1284 ntBASIC16.31■□□□□ 0.2
LCATP04180 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.31■□□□□ 0.2
LCATP04180 AC068587.9-201ENST00000641814 219 ntBASIC16.31■□□□□ 0.2
LCATP04180 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
LCATP04180 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.31■□□□□ 0.2
LCATP04180 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.31■□□□□ 0.2
LCATP04180 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LCATP04180 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCATP04180 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.31■□□□□ 0.2
LCATP04180 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LCATP04180 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.3■□□□□ 0.2
LCATP04180 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
LCATP04180 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.3■□□□□ 0.2
LCATP04180 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.3■□□□□ 0.2
LCATP04180 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
LCATP04180 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 TSPY7P-201ENST00000431358 1114 ntBASIC16.3■□□□□ 0.2
LCATP04180 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.3■□□□□ 0.2
LCATP04180 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms