Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 HTR7P1-202ENST00000624664 4411 ntBASIC16.11■□□□□ 0.17
HLA-DQB1P01920 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.11■□□□□ 0.17
HLA-DQB1P01920 AC124283.5-201ENST00000624661 1809 ntBASIC16.11■□□□□ 0.17
HLA-DQB1P01920 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 HEIH-201ENST00000623091 1652 ntBASIC16.11■□□□□ 0.17
HLA-DQB1P01920 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQB1P01920 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.1■□□□□ 0.17
HLA-DQB1P01920 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 LSM12P1-201ENST00000411836 588 ntBASIC16.1■□□□□ 0.17
HLA-DQB1P01920 AL390719.1-204ENST00000412397 1219 ntBASIC16.1■□□□□ 0.17
HLA-DQB1P01920 AC026271.2-201ENST00000428091 497 ntBASIC16.1■□□□□ 0.17
HLA-DQB1P01920 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 AC005829.2-201ENST00000571422 1056 ntBASIC16.1■□□□□ 0.17
HLA-DQB1P01920 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 REXO1L9P-201ENST00000604264 2108 ntBASIC16.1■□□□□ 0.17
HLA-DQB1P01920 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB1P01920 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 AL023806.1-201ENST00000603994 1649 ntBASIC16.09■□□□□ 0.17
HLA-DQB1P01920 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.09■□□□□ 0.17
HLA-DQB1P01920 AC005181.1-201ENST00000604782 1256 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms