Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USP1O94782 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.89■□□□□ 0.61
USP1O94782 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 AC008040.2-201ENST00000461049 708 ntBASIC18.89■□□□□ 0.61
USP1O94782 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.89■□□□□ 0.61
USP1O94782 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP1O94782 AC130371.2-201ENST00000619443 611 ntBASIC18.89■□□□□ 0.61
USP1O94782 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.89■□□□□ 0.61
USP1O94782 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP1O94782 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.89■□□□□ 0.61
USP1O94782 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
USP1O94782 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
USP1O94782 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 FAM207BP-201ENST00000447172 505 ntBASIC18.88■□□□□ 0.61
USP1O94782 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.88■□□□□ 0.61
USP1O94782 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP1O94782 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 AL354751.1-201ENST00000412768 1863 ntBASIC18.88■□□□□ 0.61
USP1O94782 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.88■□□□□ 0.61
USP1O94782 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USP1O94782 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
USP1O94782 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP1O94782 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.87■□□□□ 0.61
USP1O94782 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
USP1O94782 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP1O94782 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.87■□□□□ 0.61
USP1O94782 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.87■□□□□ 0.61
USP1O94782 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.87■□□□□ 0.61
USP1O94782 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.87■□□□□ 0.61
USP1O94782 MIR6786-201ENST00000616843 113 ntBASIC18.87■□□□□ 0.61
USP1O94782 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.86■□□□□ 0.61
USP1O94782 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.86■□□□□ 0.61
USP1O94782 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
USP1O94782 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP1O94782 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.86■□□□□ 0.61
USP1O94782 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP1O94782 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 B3GAT3P1-201ENST00000471720 806 ntBASIC18.86■□□□□ 0.61
USP1O94782 AC011506.1-201ENST00000474329 610 ntBASIC18.86■□□□□ 0.61
USP1O94782 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.86■□□□□ 0.61
USP1O94782 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms