Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.22■□□□□ 0.03
CLN5O75503 AC091874.3-201ENST00000512672 1195 ntBASIC15.22■□□□□ 0.03
CLN5O75503 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.22■□□□□ 0.03
CLN5O75503 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 AL596257.1-201ENST00000641463 2694 ntBASIC15.22■□□□□ 0.03
CLN5O75503 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLN5O75503 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.22■□□□□ 0.03
CLN5O75503 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLN5O75503 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLN5O75503 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLN5O75503 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 AL162727.3-201ENST00000635661 2787 ntBASIC15.21■□□□□ 0.03
CLN5O75503 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.21■□□□□ 0.03
CLN5O75503 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLN5O75503 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLN5O75503 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.21■□□□□ 0.03
CLN5O75503 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.21■□□□□ 0.03
CLN5O75503 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CLN5O75503 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLN5O75503 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.21■□□□□ 0.03
CLN5O75503 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLN5O75503 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLN5O75503 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.21■□□□□ 0.02
CLN5O75503 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLN5O75503 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLN5O75503 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLN5O75503 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.2■□□□□ 0.02
CLN5O75503 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLN5O75503 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLN5O75503 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLN5O75503 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 MIR935-201ENST00000401179 91 ntBASIC15.2■□□□□ 0.02
CLN5O75503 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLN5O75503 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.2■□□□□ 0.02
CLN5O75503 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.2■□□□□ 0.02
CLN5O75503 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLN5O75503 AC006557.6-201ENST00000623071 864 ntBASIC15.2■□□□□ 0.02
CLN5O75503 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms