Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RCN1P1-201ENST00000400413 996 ntBASIC17.39■□□□□ 0.37
TRIM3O75382 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TRIM3O75382 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM3O75382 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 SLC25A3P1-201ENST00000443844 931 ntBASIC17.39■□□□□ 0.37
TRIM3O75382 ECEL1P2-202ENST00000465689 757 ntBASIC17.39■□□□□ 0.37
TRIM3O75382 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM3O75382 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM3O75382 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TRIM3O75382 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM3O75382 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM3O75382 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM3O75382 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM3O75382 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM3O75382 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM3O75382 AC092338.2-201ENST00000568827 1415 ntBASIC17.38■□□□□ 0.37
TRIM3O75382 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM3O75382 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM3O75382 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TRIM3O75382 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 NOC2LP1-202ENST00000452600 2235 ntBASIC17.38■□□□□ 0.37
TRIM3O75382 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 AC113347.1-201ENST00000413321 391 ntBASIC17.38■□□□□ 0.37
TRIM3O75382 TSPY17P-201ENST00000450329 467 ntBASIC17.38■□□□□ 0.37
TRIM3O75382 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.38■□□□□ 0.37
TRIM3O75382 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 FAM87A-204ENST00000613235 858 ntBASIC17.38■□□□□ 0.37
TRIM3O75382 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM3O75382 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM3O75382 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TRIM3O75382 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM3O75382 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRIM3O75382 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM3O75382 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM3O75382 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM3O75382 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM3O75382 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM3O75382 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM3O75382 AL353719.1-201ENST00000566847 864 ntBASIC17.37■□□□□ 0.37
TRIM3O75382 AC010653.2-201ENST00000623505 997 ntBASIC17.37■□□□□ 0.37
TRIM3O75382 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM3O75382 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM3O75382 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM3O75382 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM3O75382 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
TRIM3O75382 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRIM3O75382 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM3O75382 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TRIM3O75382 AC005521.1-201ENST00000393351 872 ntBASIC17.36■□□□□ 0.37
TRIM3O75382 AC007663.1-201ENST00000438948 1240 ntBASIC17.36■□□□□ 0.37
TRIM3O75382 KRT18P21-201ENST00000515767 1272 ntBASIC17.36■□□□□ 0.37
TRIM3O75382 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRIM3O75382 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM3O75382 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms