Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SCN2BO60939 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.71■□□□□ 0.43
SCN2BO60939 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.71■□□□□ 0.43
SCN2BO60939 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.71■□□□□ 0.43
SCN2BO60939 AC011506.1-201ENST00000474329 610 ntBASIC17.71■□□□□ 0.43
SCN2BO60939 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.71■□□□□ 0.43
SCN2BO60939 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 AC026271.3-201ENST00000571884 352 ntBASIC17.71■□□□□ 0.43
SCN2BO60939 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.71■□□□□ 0.43
SCN2BO60939 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SCN2BO60939 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 KRT16P1-201ENST00000399124 1418 ntBASIC17.71■□□□□ 0.43
SCN2BO60939 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCN2BO60939 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCN2BO60939 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN2BO60939 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 AL353807.1-201ENST00000427475 662 ntBASIC17.7■□□□□ 0.42
SCN2BO60939 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 RPPH1-201ENST00000516869 333 ntBASIC17.7■□□□□ 0.42
SCN2BO60939 C1QBPP2-201ENST00000528754 825 ntBASIC17.7■□□□□ 0.42
SCN2BO60939 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.7■□□□□ 0.42
SCN2BO60939 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN2BO60939 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN2BO60939 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 AC026471.1-201ENST00000564629 3026 ntBASIC17.7■□□□□ 0.42
SCN2BO60939 KRT8P45-201ENST00000414328 1447 ntBASIC17.7■□□□□ 0.42
SCN2BO60939 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCN2BO60939 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
SCN2BO60939 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCN2BO60939 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SCN2BO60939 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN2BO60939 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN2BO60939 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCN2BO60939 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN2BO60939 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SCN2BO60939 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 MESTP1-201ENST00000404287 994 ntBASIC17.69■□□□□ 0.42
SCN2BO60939 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN2BO60939 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.69■□□□□ 0.42
SCN2BO60939 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.69■□□□□ 0.42
SCN2BO60939 RARRES2P10-201ENST00000564312 460 ntBASIC17.69■□□□□ 0.42
SCN2BO60939 AF186192.3-201ENST00000583427 947 ntBASIC17.69■□□□□ 0.42
SCN2BO60939 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.69■□□□□ 0.42
SCN2BO60939 AC011298.2-201ENST00000617989 482 ntBASIC17.69■□□□□ 0.42
SCN2BO60939 CR392000.1-201ENST00000624770 1228 ntBASIC17.69■□□□□ 0.42
SCN2BO60939 AL031985.4-201ENST00000642138 673 ntBASIC17.69■□□□□ 0.42
SCN2BO60939 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN2BO60939 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.69■□□□□ 0.42
SCN2BO60939 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms