Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA2O43464 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HTRA2O43464 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA2O43464 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA2O43464 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.83■□□□□ 0.6
HTRA2O43464 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA2O43464 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.83■□□□□ 0.6
HTRA2O43464 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.83■□□□□ 0.6
HTRA2O43464 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.82■□□□□ 0.6
HTRA2O43464 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HTRA2O43464 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
HTRA2O43464 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.82■□□□□ 0.6
HTRA2O43464 AL357033.4-201ENST00000617703 1807 ntBASIC18.82■□□□□ 0.6
HTRA2O43464 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.82■□□□□ 0.6
HTRA2O43464 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.82■□□□□ 0.6
HTRA2O43464 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 TMPOP1-202ENST00000424642 1267 ntBASIC18.82■□□□□ 0.6
HTRA2O43464 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.82■□□□□ 0.6
HTRA2O43464 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.82■□□□□ 0.6
HTRA2O43464 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.82■□□□□ 0.6
HTRA2O43464 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.82■□□□□ 0.6
HTRA2O43464 AC006011.2-201ENST00000621313 1158 ntBASIC18.82■□□□□ 0.6
HTRA2O43464 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.82■□□□□ 0.6
HTRA2O43464 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.82■□□□□ 0.6
HTRA2O43464 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HTRA2O43464 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTRA2O43464 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 AC093525.10-201ENST00000625130 1569 ntBASIC18.81■□□□□ 0.6
HTRA2O43464 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HTRA2O43464 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.81■□□□□ 0.6
HTRA2O43464 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
HTRA2O43464 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.81■□□□□ 0.6
HTRA2O43464 COX11P1-201ENST00000489116 835 ntBASIC18.81■□□□□ 0.6
HTRA2O43464 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.81■□□□□ 0.6
HTRA2O43464 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.81■□□□□ 0.6
HTRA2O43464 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
HTRA2O43464 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTRA2O43464 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA2O43464 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HTRA2O43464 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 AP000523.1-201ENST00000398242 1049 ntBASIC18.8■□□□□ 0.6
HTRA2O43464 AC117947.1-201ENST00000427448 529 ntBASIC18.8■□□□□ 0.6
HTRA2O43464 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.8■□□□□ 0.6
HTRA2O43464 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA2O43464 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.8■□□□□ 0.6
HTRA2O43464 AC104076.2-201ENST00000448912 469 ntBASIC18.8■□□□□ 0.6
HTRA2O43464 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.8■□□□□ 0.6
HTRA2O43464 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 Z98044.1-201ENST00000632503 1764 ntBASIC18.8■□□□□ 0.6
HTRA2O43464 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA2O43464 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HTRA2O43464 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.8■□□□□ 0.6
HTRA2O43464 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA2O43464 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA2O43464 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA2O43464 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HTRA2O43464 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA2O43464 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA2O43464 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HTRA2O43464 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA2O43464 AC034236.2-201ENST00000606662 1610 ntBASIC18.79■□□□□ 0.6
HTRA2O43464 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HTRA2O43464 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms