Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TREX1-205ENST00000625293 1783 ntBASIC31.86■■■□□ 2.69
CUX2O14529 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CUX2O14529 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CUX2O14529 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC31.86■■■□□ 2.69
CUX2O14529 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CUX2O14529 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC31.86■■■□□ 2.69
CUX2O14529 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CUX2O14529 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CUX2O14529 DDT-206ENST00000430101 573 ntTSL 2 BASIC31.85■■■□□ 2.69
CUX2O14529 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC31.85■■■□□ 2.69
CUX2O14529 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC31.85■■■□□ 2.69
CUX2O14529 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CUX2O14529 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC31.85■■■□□ 2.69
CUX2O14529 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CUX2O14529 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC31.85■■■□□ 2.69
CUX2O14529 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC31.85■■■□□ 2.69
CUX2O14529 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CUX2O14529 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CUX2O14529 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC31.85■■■□□ 2.69
CUX2O14529 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC31.85■■■□□ 2.69
CUX2O14529 AL353692.3-201ENST00000407031 1396 ntBASIC31.85■■■□□ 2.69
CUX2O14529 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC31.84■■■□□ 2.69
CUX2O14529 AC005225.4-201ENST00000557330 545 ntBASIC31.84■■■□□ 2.69
CUX2O14529 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 Z92544.3-201ENST00000624747 417 ntBASIC31.84■■■□□ 2.69
CUX2O14529 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC31.84■■■□□ 2.69
CUX2O14529 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC31.84■■■□□ 2.69
CUX2O14529 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC31.84■■■□□ 2.69
CUX2O14529 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC31.84■■■□□ 2.69
CUX2O14529 AC015922.1-201ENST00000421102 1152 ntBASIC31.84■■■□□ 2.69
CUX2O14529 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC31.84■■■□□ 2.69
CUX2O14529 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC31.84■■■□□ 2.69
CUX2O14529 MIR4745-201ENST00000577608 62 ntBASIC31.84■■■□□ 2.69
CUX2O14529 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC31.84■■■□□ 2.69
CUX2O14529 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CUX2O14529 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CUX2O14529 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CUX2O14529 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CUX2O14529 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC31.83■■■□□ 2.69
CUX2O14529 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CUX2O14529 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC31.83■■■□□ 2.69
CUX2O14529 AC002310.6-201ENST00000624451 1377 ntBASIC31.83■■■□□ 2.69
CUX2O14529 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
CUX2O14529 AC064836.3-201ENST00000607928 673 ntBASIC31.83■■■□□ 2.69
CUX2O14529 SERF2-217ENST00000630046 862 ntTSL 5 BASIC31.83■■■□□ 2.69
CUX2O14529 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CUX2O14529 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CUX2O14529 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.69
CUX2O14529 AP005212.1-201ENST00000581547 1997 ntBASIC31.82■■■□□ 2.69
CUX2O14529 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
CUX2O14529 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
CUX2O14529 PBK-203ENST00000522944 1499 ntTSL 2 BASIC31.82■■■□□ 2.68
CUX2O14529 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CUX2O14529 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC31.82■■■□□ 2.68
CUX2O14529 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CUX2O14529 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC31.82■■■□□ 2.68
CUX2O14529 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC31.82■■■□□ 2.68
CUX2O14529 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC31.82■■■□□ 2.68
CUX2O14529 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC31.82■■■□□ 2.68
CUX2O14529 KRT8P7-201ENST00000533003 1432 ntBASIC31.82■■■□□ 2.68
CUX2O14529 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CUX2O14529 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
CUX2O14529 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
CUX2O14529 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
CUX2O14529 HOXB1-202ENST00000577092 1414 ntBASIC31.81■■■□□ 2.68
CUX2O14529 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CUX2O14529 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CUX2O14529 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
CUX2O14529 RCN1P2-201ENST00000398357 915 ntBASIC31.81■■■□□ 2.68
CUX2O14529 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC31.81■■■□□ 2.68
CUX2O14529 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CUX2O14529 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC31.81■■■□□ 2.68
CUX2O14529 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC31.81■■■□□ 2.68
CUX2O14529 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC31.81■■■□□ 2.68
CUX2O14529 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CUX2O14529 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC31.81■■■□□ 2.68
CUX2O14529 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CUX2O14529 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CUX2O14529 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CUX2O14529 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC31.8■■■□□ 2.68
CUX2O14529 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CUX2O14529 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CUX2O14529 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC31.8■■■□□ 2.68
CUX2O14529 RPS29-206ENST00000557111 488 ntTSL 2 BASIC31.8■■■□□ 2.68
CUX2O14529 KRT89P-201ENST00000620027 1478 ntBASIC31.8■■■□□ 2.68
CUX2O14529 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
CUX2O14529 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CUX2O14529 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.8■■■□□ 2.68
CUX2O14529 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC31.8■■■□□ 2.68
CUX2O14529 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CUX2O14529 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CUX2O14529 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CUX2O14529 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms