Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC28A1O00337 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SLC28A1O00337 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC28A1O00337 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC28A1O00337 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC28A1O00337 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A1O00337 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC28A1O00337 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A1O00337 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
SLC28A1O00337 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC28A1O00337 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC28A1O00337 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC28A1O00337 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC28A1O00337 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC28A1O00337 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC28A1O00337 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC28A1O00337 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A1O00337 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC28A1O00337 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC28A1O00337 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SLC28A1O00337 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC28A1O00337 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC28A1O00337 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A1O00337 MIR6786-201ENST00000616843 113 ntBASIC17.97■□□□□ 0.47
SLC28A1O00337 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC28A1O00337 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC28A1O00337 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC28A1O00337 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC28A1O00337 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A1O00337 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A1O00337 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC28A1O00337 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A1O00337 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A1O00337 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 AC011506.1-201ENST00000474329 610 ntBASIC17.96■□□□□ 0.47
SLC28A1O00337 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
SLC28A1O00337 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC28A1O00337 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A1O00337 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC28A1O00337 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A1O00337 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A1O00337 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A1O00337 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.96■□□□□ 0.46
SLC28A1O00337 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A1O00337 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A1O00337 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms