Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 KRT18P57-201ENST00000443599 1254 ntBASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 AC121493.1-201ENST00000602316 450 ntBASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.02■□□□□ 0.95
SPDYE4A6NLX3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SPDYE4A6NLX3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SPDYE4A6NLX3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 AL390955.1-201ENST00000428694 934 ntBASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 KRT16P1-201ENST00000399124 1418 ntBASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 KRT8P9-201ENST00000558927 1449 ntBASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.01■□□□□ 0.95
SPDYE4A6NLX3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 TMEM179-206ENST00000616017 1645 ntBASIC21■□□□□ 0.95
SPDYE4A6NLX3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 AL137013.1-201ENST00000432946 1228 ntBASIC21■□□□□ 0.95
SPDYE4A6NLX3 KSR1P1-201ENST00000446298 240 ntBASIC21■□□□□ 0.95
SPDYE4A6NLX3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21■□□□□ 0.95
SPDYE4A6NLX3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 KRT18P22-201ENST00000402024 1347 ntBASIC21■□□□□ 0.95
SPDYE4A6NLX3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDYE4A6NLX3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 AC009053.2-201ENST00000563701 2365 ntBASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms