Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
TMEM88BA6NKF7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 AP002414.3-201ENST00000589352 1468 ntBASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM88BA6NKF7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 CNN2P11-201ENST00000429351 262 ntBASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 ABCD1P5-201ENST00000445663 754 ntBASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TMEM88BA6NKF7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM88BA6NKF7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 PAWRP1-201ENST00000451083 565 ntBASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 MIR1199-201ENST00000621445 119 ntBASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM88BA6NKF7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms