Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 AL390955.1-201ENST00000428694 934 ntBASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 FITM1-202ENST00000559294 800 ntBASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.51■□□□□ 0.39
PRAMEF25A6NGN4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 AC068880.1-201ENST00000507289 2297 ntBASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF25A6NGN4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 MMP23A-201ENST00000234610 1017 ntBASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 CKBP1-201ENST00000565489 1086 ntBASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 AC073912.3-201ENST00000624414 853 ntBASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 AC073592.3-201ENST00000625118 1834 ntBASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 AL499627.1-201ENST00000569373 2188 ntBASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF25A6NGN4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF25A6NGN4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms