Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 MCCD1P2-201ENST00000423228 335 ntBASIC17.78■□□□□ 0.44
CNOT1A5YKK6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.78■□□□□ 0.44
CNOT1A5YKK6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 Z83851.2-201ENST00000609564 659 ntBASIC17.78■□□□□ 0.44
CNOT1A5YKK6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT1A5YKK6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 RPS2P1-201ENST00000434010 821 ntBASIC17.77■□□□□ 0.44
CNOT1A5YKK6 AC244107.1-201ENST00000442033 332 ntBASIC17.77■□□□□ 0.44
CNOT1A5YKK6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 HLA-J-203ENST00000494367 1087 ntBASIC17.77■□□□□ 0.44
CNOT1A5YKK6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT1A5YKK6 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.77■□□□□ 0.43
CNOT1A5YKK6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 AC008556.1-201ENST00000610908 2040 ntBASIC17.77■□□□□ 0.43
CNOT1A5YKK6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT1A5YKK6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.76■□□□□ 0.43
CNOT1A5YKK6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT1A5YKK6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 AC009533.2-201ENST00000543664 586 ntBASIC17.75■□□□□ 0.43
CNOT1A5YKK6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.75■□□□□ 0.43
CNOT1A5YKK6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms