Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IGHGP-201ENST00000390555 1178 ntBASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 SLC25A6P4-201ENST00000586535 553 ntBASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 AL592071.1-201ENST00000611956 408 ntBASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC187A0A096LP49 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 AC006333.2-201ENST00000607957 2099 ntBASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC187A0A096LP49 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC187A0A096LP49 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC187A0A096LP49 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC187A0A096LP49 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC187A0A096LP49 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
CCDC187A0A096LP49 FEM1AP3-201ENST00000403722 1741 ntBASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 KRT16P4-201ENST00000453883 522 ntBASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 AC079776.4-201ENST00000511039 504 ntBASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 AC023511.2-201ENST00000618803 211 ntBASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 AC124864.1-201ENST00000623408 392 ntBASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC187A0A096LP49 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms