Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 ZNF815P-204ENST00000434898 1737 ntBASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN7Q9Y6W3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 AC018553.1-201ENST00000616682 1458 ntBASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 AC023632.3-201ENST00000521633 145 ntBASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.73■□□□□ 0.59
CAPN7Q9Y6W3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 YBX1P1-201ENST00000445822 960 ntBASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN7Q9Y6W3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 KRT18P68-201ENST00000392293 1000 ntBASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 AC007322.4-201ENST00000509611 723 ntBASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN7Q9Y6W3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CAPN7Q9Y6W3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN7Q9Y6W3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN7Q9Y6W3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN7Q9Y6W3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms