Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AL162741.1-201ENST00000565563 1558 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 KRT18P23-201ENST00000435622 1283 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 KRT8P26-201ENST00000534154 1276 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AL121894.2-201ENST00000602977 491 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AL158211.5-201ENST00000623583 2518 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 AL391807.1-203ENST00000604392 2365 ntBASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSNK1G3Q9Y6M4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 MIR564-202ENST00000385049 94 ntBASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 MIR3652-201ENST00000579335 131 ntBASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 AC092119.3-201ENST00000612618 583 ntBASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 AC116562.4-201ENST00000641316 2276 ntBASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSNK1G3Q9Y6M4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 KRT8P32-201ENST00000512863 1461 ntBASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CSNK1G3Q9Y6M4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 MIR3180-4-201ENST00000582223 153 ntBASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms