Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN16Q9Y5I7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 MIR3917-201ENST00000580971 93 ntBASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 AC010240.3-201ENST00000607688 395 ntBASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 AC010331.1-201ENST00000611423 582 ntBASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN16Q9Y5I7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 MIR1224-201ENST00000408193 85 ntBASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 HOMER2P1-201ENST00000455653 964 ntBASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN16Q9Y5I7 AC004408.2-201ENST00000623613 2777 ntBASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 AP000593.1-201ENST00000393668 712 ntBASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 RASA4DP-201ENST00000460726 1199 ntBASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 MIR3180-4-201ENST00000582223 153 ntBASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 AL157888.1-201ENST00000631930 593 ntBASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN16Q9Y5I7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN16Q9Y5I7 AC112777.1-201ENST00000540175 1423 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms