Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 RPPH1-201ENST00000516869 333 ntBASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 RARRES2P10-201ENST00000564312 460 ntBASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 AC073195.1-201ENST00000607241 877 ntBASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 AC135776.1-201ENST00000319817 2481 ntBASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHA3Q9Y5H8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 FAM207BP-201ENST00000447172 505 ntBASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHA3Q9Y5H8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 AC067852.2-201ENST00000590513 2313 ntBASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.52■□□□□ 0.71
PCDHA3Q9Y5H8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 MIR6786-201ENST00000616843 113 ntBASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHA3Q9Y5H8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 AP000997.3-201ENST00000623333 2250 ntBASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 AL109659.2-201ENST00000606809 1674 ntBASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 B3GAT3P1-201ENST00000471720 806 ntBASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 KRT18P41-201ENST00000518924 1277 ntBASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 MIR4651-201ENST00000582622 73 ntBASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms