Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 DUSP5P1-201ENST00000441325 1139 ntBASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 AL359075.1-203ENST00000462729 1002 ntBASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 AP000974.1-201ENST00000623909 2387 ntBASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 KRT8P32-201ENST00000512863 1461 ntBASIC18.97■□□□□ 0.63
PCDHB9Q9Y5E1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 RCC2P3-201ENST00000418112 1537 ntBASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 AC069148.1-201ENST00000608741 768 ntBASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 AC006333.2-201ENST00000607957 2099 ntBASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB9Q9Y5E1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB9Q9Y5E1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 MCCD1P1-208ENST00000445732 328 ntBASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 AC087289.5-201ENST00000586076 3175 ntBASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB9Q9Y5E1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms