Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 KRT8P7-201ENST00000533003 1432 ntBASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 MIR3917-201ENST00000580971 93 ntBASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.58■■□□□ 1.05
CTDP1Q9Y5B0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTDP1Q9Y5B0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTDP1Q9Y5B0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTDP1Q9Y5B0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTDP1Q9Y5B0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
CTDP1Q9Y5B0 AC141586.3-201ENST00000562166 1838 ntBASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTDP1Q9Y5B0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 SPDYE13P-201ENST00000445314 798 ntBASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 BX276092.5-203ENST00000456199 560 ntBASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 AL136038.4-201ENST00000603606 1261 ntBASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTDP1Q9Y5B0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 MIR564-202ENST00000385049 94 ntBASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 KRT126P-201ENST00000549467 1181 ntBASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTDP1Q9Y5B0 KRT8P32-201ENST00000512863 1461 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms