Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 AC092437.1-201ENST00000624794 1048 ntBASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 PP12613-201ENST00000424958 2230 ntBASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH1Q9Y2L9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 KRT18P11-201ENST00000435214 1283 ntBASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH1Q9Y2L9 AL513477.1-201ENST00000602865 2407 ntBASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 AL121761.2-201ENST00000598007 1648 ntBASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 AC091799.1-201ENST00000422823 811 ntBASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 MST1L-201ENST00000442552 2185 ntBASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH1Q9Y2L9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms