Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS9D1Q9Y2B5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 SLC25A1P2-201ENST00000430693 912 ntBASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 KRT18P41-201ENST00000518924 1277 ntBASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 AC079598.2-202ENST00000546624 1451 ntBASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS9D1Q9Y2B5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 RBM17P1-201ENST00000453646 1190 ntBASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 AC098799.1-201ENST00000504752 800 ntBASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 AC005082.1-201ENST00000413042 2259 ntBASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS9D1Q9Y2B5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 AP000593.1-201ENST00000393668 712 ntBASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 AL023284.2-201ENST00000405850 579 ntBASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 TSPY17P-201ENST00000450329 467 ntBASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms