Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GNEQ9Y223 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.79■□□□□ 0.92
GNEQ9Y223 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.79■□□□□ 0.92
GNEQ9Y223 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.79■□□□□ 0.92
GNEQ9Y223 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.79■□□□□ 0.92
GNEQ9Y223 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
GNEQ9Y223 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GNEQ9Y223 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.79■□□□□ 0.92
GNEQ9Y223 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.79■□□□□ 0.92
GNEQ9Y223 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.79■□□□□ 0.92
GNEQ9Y223 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.79■□□□□ 0.92
GNEQ9Y223 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GNEQ9Y223 AC024563.2-201ENST00000603282 481 ntBASIC20.79■□□□□ 0.92
GNEQ9Y223 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.79■□□□□ 0.92
GNEQ9Y223 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GNEQ9Y223 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GNEQ9Y223 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.79■□□□□ 0.92
GNEQ9Y223 LINC00167-201ENST00000530583 1419 ntBASIC20.78■□□□□ 0.92
GNEQ9Y223 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
GNEQ9Y223 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.78■□□□□ 0.92
GNEQ9Y223 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GNEQ9Y223 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.78■□□□□ 0.92
GNEQ9Y223 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.78■□□□□ 0.92
GNEQ9Y223 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.78■□□□□ 0.92
GNEQ9Y223 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.78■□□□□ 0.92
GNEQ9Y223 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 AC106795.1-205ENST00000512851 1056 ntBASIC20.78■□□□□ 0.92
GNEQ9Y223 LINC01711-201ENST00000598340 967 ntBASIC20.78■□□□□ 0.92
GNEQ9Y223 AL592071.1-201ENST00000611956 408 ntBASIC20.78■□□□□ 0.92
GNEQ9Y223 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.78■□□□□ 0.92
GNEQ9Y223 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GNEQ9Y223 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GNEQ9Y223 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.77■□□□□ 0.92
GNEQ9Y223 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GNEQ9Y223 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.77■□□□□ 0.92
GNEQ9Y223 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
GNEQ9Y223 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GNEQ9Y223 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GNEQ9Y223 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GNEQ9Y223 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.77■□□□□ 0.92
GNEQ9Y223 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.77■□□□□ 0.92
GNEQ9Y223 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GNEQ9Y223 AP002469.2-201ENST00000531724 424 ntBASIC20.77■□□□□ 0.92
GNEQ9Y223 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
GNEQ9Y223 Z69720.1-201ENST00000601483 472 ntBASIC20.77■□□□□ 0.92
GNEQ9Y223 AC138894.3-201ENST00000603787 634 ntBASIC20.77■□□□□ 0.92
GNEQ9Y223 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.77■□□□□ 0.92
GNEQ9Y223 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.77■□□□□ 0.92
GNEQ9Y223 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GNEQ9Y223 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.77■□□□□ 0.92
GNEQ9Y223 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.77■□□□□ 0.91
GNEQ9Y223 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GNEQ9Y223 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GNEQ9Y223 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GNEQ9Y223 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.76■□□□□ 0.91
GNEQ9Y223 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GNEQ9Y223 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
GNEQ9Y223 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
GNEQ9Y223 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.76■□□□□ 0.91
GNEQ9Y223 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.76■□□□□ 0.91
GNEQ9Y223 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.76■□□□□ 0.91
GNEQ9Y223 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.76■□□□□ 0.91
GNEQ9Y223 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.76■□□□□ 0.91
GNEQ9Y223 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.76■□□□□ 0.91
GNEQ9Y223 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
GNEQ9Y223 SLC25A6P4-201ENST00000586535 553 ntBASIC20.76■□□□□ 0.91
GNEQ9Y223 AC099336.1-202ENST00000602961 463 ntBASIC20.76■□□□□ 0.91
GNEQ9Y223 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.76■□□□□ 0.91
GNEQ9Y223 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
GNEQ9Y223 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
GNEQ9Y223 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GNEQ9Y223 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms