Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 AC124016.1-201ENST00000609552 612 ntBASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 TNRC18P3-201ENST00000441896 2691 ntBASIC13.67□□□□□ -0.22
HHLA3Q9XRX5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AC124067.4-201ENST00000519691 2379 ntBASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AC133681.1-201ENST00000465482 601 ntBASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.66□□□□□ -0.22
HHLA3Q9XRX5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms