Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2BQ9UQN3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2BQ9UQN3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 AC124016.1-201ENST00000609552 612 ntBASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 AL445675.2-201ENST00000620291 557 ntBASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2BQ9UQN3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CHMP2BQ9UQN3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 AC004980.1-204ENST00000429707 299 ntBASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 AC131212.4-201ENST00000623606 975 ntBASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 KRT8P32-201ENST00000512863 1461 ntBASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP2BQ9UQN3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 ESRRAP1-201ENST00000400596 1257 ntBASIC19■□□□□ 0.63
CHMP2BQ9UQN3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms