Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 TMEM191A-211ENST00000637163 1067 ntBASIC16.4■□□□□ 0.22
DUX4Q9UBX2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX4Q9UBX2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
DUX4Q9UBX2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
DUX4Q9UBX2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 AL133373.2-201ENST00000623187 2828 ntBASIC16.39■□□□□ 0.21
DUX4Q9UBX2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 AL158047.1-201ENST00000445918 881 ntBASIC16.39■□□□□ 0.21
DUX4Q9UBX2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 RPPH1-201ENST00000516869 333 ntBASIC16.39■□□□□ 0.21
DUX4Q9UBX2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 AC124016.1-201ENST00000609552 612 ntBASIC16.39■□□□□ 0.21
DUX4Q9UBX2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 AL359736.2-201ENST00000621992 437 ntBASIC16.39■□□□□ 0.21
DUX4Q9UBX2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX4Q9UBX2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 AC063926.3-201ENST00000624734 5658 ntBASIC16.38■□□□□ 0.21
DUX4Q9UBX2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 GCSHP5-201ENST00000443090 522 ntBASIC16.38■□□□□ 0.21
DUX4Q9UBX2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 PRKY-204ENST00000533551 1019 ntBASIC16.38■□□□□ 0.21
DUX4Q9UBX2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 AP006587.1-201ENST00000534129 1502 ntBASIC16.38■□□□□ 0.21
DUX4Q9UBX2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DUX4Q9UBX2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms