Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PCED1CP-201ENST00000419887 785 ntBASIC17.57■□□□□ 0.4
CTSFQ9UBX1 UPK3BP1-201ENST00000428678 509 ntBASIC17.57■□□□□ 0.4
CTSFQ9UBX1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 KRT18P23-201ENST00000435622 1283 ntBASIC17.57■□□□□ 0.4
CTSFQ9UBX1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 AC092597.1-201ENST00000487352 616 ntBASIC17.57■□□□□ 0.4
CTSFQ9UBX1 VENTXP5-201ENST00000523979 775 ntBASIC17.57■□□□□ 0.4
CTSFQ9UBX1 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 AC068587.9-201ENST00000641814 219 ntBASIC17.57■□□□□ 0.4
CTSFQ9UBX1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 AC005332.1-201ENST00000577698 1310 ntBASIC17.56■□□□□ 0.4
CTSFQ9UBX1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 ZNF444P1-201ENST00000559497 298 ntBASIC17.56■□□□□ 0.4
CTSFQ9UBX1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 AP000550.4-202ENST00000639755 178 ntBASIC17.56■□□□□ 0.4
CTSFQ9UBX1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTSFQ9UBX1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 IER3-202ENST00000376377 1350 ntBASIC17.55■□□□□ 0.4
CTSFQ9UBX1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 AL157888.1-201ENST00000631930 593 ntBASIC17.55■□□□□ 0.4
CTSFQ9UBX1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTSFQ9UBX1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTSFQ9UBX1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSFQ9UBX1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSFQ9UBX1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms