Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRMT13Q9NUP7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRMT13Q9NUP7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.48■□□□□ 0.87
TRMT13Q9NUP7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
TRMT13Q9NUP7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRMT13Q9NUP7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 NSUN5P1-202ENST00000421140 1535 ntBASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 NSUN5P2-203ENST00000457352 1529 ntBASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRMT13Q9NUP7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 GUSBP12-201ENST00000513727 720 ntBASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRMT13Q9NUP7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 NUS1P2-201ENST00000417358 873 ntBASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 AC120114.3-201ENST00000611923 658 ntBASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.45■□□□□ 0.86
TRMT13Q9NUP7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.44■□□□□ 0.86
TRMT13Q9NUP7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms