Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ECEL1P2-201ENST00000461596 1295 ntBASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 AL691432.2-201ENST00000607222 2038 ntBASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 FP475955.4-201ENST00000623131 1990 ntBASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.59□□□□□ -0.87
CDC42SE1Q9NRR8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 DBET-201ENST00000630918 3363 ntBASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 AL009178.2-201ENST00000597278 2719 ntBASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 AL133380.1-201ENST00000506013 324 ntBASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CDC42SE1Q9NRR8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CDC42SE1Q9NRR8 ANKRD18DP-204ENST00000455355 1975 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms