Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 AC026471.1-201ENST00000564629 3026 ntBASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 KRT16P1-201ENST00000399124 1418 ntBASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CTPS2Q9NRF8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 AL390961.4-201ENST00000623958 2535 ntBASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CTPS2Q9NRF8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 AL135905.2-201ENST00000584934 1404 ntBASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 AC126763.1-201ENST00000552015 2118 ntBASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTPS2Q9NRF8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 AC135050.7-201ENST00000624508 2218 ntBASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms