Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.31■□□□□ 0.2
ELL3Q9HB65 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ELL3Q9HB65 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 AL512353.2-201ENST00000448759 1962 ntBASIC16.3■□□□□ 0.2
ELL3Q9HB65 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 AL031598.1-201ENST00000561511 1773 ntBASIC16.3■□□□□ 0.2
ELL3Q9HB65 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.3■□□□□ 0.2
ELL3Q9HB65 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ELL3Q9HB65 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 RN7SL471P-201ENST00000580476 299 ntBASIC16.29■□□□□ 0.2
ELL3Q9HB65 AC090164.3-201ENST00000610780 2143 ntBASIC16.29■□□□□ 0.2
ELL3Q9HB65 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 PKD1P5-201ENST00000532415 10291 ntBASIC16.29■□□□□ 0.2
ELL3Q9HB65 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ELL3Q9HB65 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
ELL3Q9HB65 NBPF21P-201ENST00000425093 1451 ntBASIC16.29■□□□□ 0.2
ELL3Q9HB65 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ELL3Q9HB65 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ELL3Q9HB65 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ELL3Q9HB65 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 AC005082.1-201ENST00000413042 2259 ntBASIC16.28■□□□□ 0.2
ELL3Q9HB65 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ELL3Q9HB65 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ELL3Q9HB65 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ELL3Q9HB65 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.28■□□□□ 0.2
ELL3Q9HB65 AC098590.1-201ENST00000468126 897 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms