Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 MIR564-202ENST00000385049 94 ntBASIC17.87■□□□□ 0.45
BRF2Q9HAW0 CRYGFP-201ENST00000418459 633 ntBASIC17.87■□□□□ 0.45
BRF2Q9HAW0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 AP003071.4-201ENST00000562276 1284 ntBASIC17.87■□□□□ 0.45
BRF2Q9HAW0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 TMEM191A-211ENST00000637163 1067 ntBASIC17.87■□□□□ 0.45
BRF2Q9HAW0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.87■□□□□ 0.45
BRF2Q9HAW0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.87■□□□□ 0.45
BRF2Q9HAW0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 AL390961.4-201ENST00000623958 2535 ntBASIC17.86■□□□□ 0.45
BRF2Q9HAW0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 UNC93B2-201ENST00000285383 730 ntBASIC17.86■□□□□ 0.45
BRF2Q9HAW0 AP000593.1-201ENST00000393668 712 ntBASIC17.86■□□□□ 0.45
BRF2Q9HAW0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 MIR4785-201ENST00000585005 73 ntBASIC17.86■□□□□ 0.45
BRF2Q9HAW0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 AL354751.1-201ENST00000412768 1863 ntBASIC17.86■□□□□ 0.45
BRF2Q9HAW0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRF2Q9HAW0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 MYLKP1-201ENST00000509077 1580 ntBASIC17.85■□□□□ 0.45
BRF2Q9HAW0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
BRF2Q9HAW0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 AP006294.2-201ENST00000641667 209 ntBASIC17.84■□□□□ 0.45
BRF2Q9HAW0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms