Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.86■□□□□ 0.45
PIF1Q9H611 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PIF1Q9H611 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PIF1Q9H611 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PIF1Q9H611 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.85■□□□□ 0.45
PIF1Q9H611 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PIF1Q9H611 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PIF1Q9H611 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.85■□□□□ 0.45
PIF1Q9H611 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PIF1Q9H611 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.85■□□□□ 0.45
PIF1Q9H611 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.85■□□□□ 0.45
PIF1Q9H611 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.85■□□□□ 0.45
PIF1Q9H611 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.85■□□□□ 0.45
PIF1Q9H611 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.85■□□□□ 0.45
PIF1Q9H611 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PIF1Q9H611 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PIF1Q9H611 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PIF1Q9H611 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PIF1Q9H611 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PIF1Q9H611 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.84■□□□□ 0.45
PIF1Q9H611 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.84■□□□□ 0.45
PIF1Q9H611 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 AL121829.2-201ENST00000620908 328 ntBASIC17.84■□□□□ 0.45
PIF1Q9H611 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.84■□□□□ 0.45
PIF1Q9H611 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PIF1Q9H611 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PIF1Q9H611 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PIF1Q9H611 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PIF1Q9H611 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PIF1Q9H611 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.83■□□□□ 0.45
PIF1Q9H611 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PIF1Q9H611 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.83■□□□□ 0.45
PIF1Q9H611 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PIF1Q9H611 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.83■□□□□ 0.45
PIF1Q9H611 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.83■□□□□ 0.45
PIF1Q9H611 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PIF1Q9H611 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.83■□□□□ 0.45
PIF1Q9H611 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 TSPY23P-201ENST00000440136 739 ntBASIC17.83■□□□□ 0.44
PIF1Q9H611 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.83■□□□□ 0.44
PIF1Q9H611 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.83■□□□□ 0.44
PIF1Q9H611 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.83■□□□□ 0.44
PIF1Q9H611 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.83■□□□□ 0.44
PIF1Q9H611 AC098934.4-201ENST00000564127 592 ntBASIC17.83■□□□□ 0.44
PIF1Q9H611 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.83■□□□□ 0.44
PIF1Q9H611 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.83■□□□□ 0.44
PIF1Q9H611 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 AC073592.3-201ENST00000625118 1834 ntBASIC17.83■□□□□ 0.44
PIF1Q9H611 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PIF1Q9H611 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PIF1Q9H611 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PIF1Q9H611 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
PIF1Q9H611 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PIF1Q9H611 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.82■□□□□ 0.44
PIF1Q9H611 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PIF1Q9H611 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PIF1Q9H611 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms