Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 GPAT2P1-201ENST00000444924 1672 ntBASIC23.55■■□□□ 1.36
CHMP4BQ9H444 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 AL353719.1-201ENST00000566847 864 ntBASIC23.55■■□□□ 1.36
CHMP4BQ9H444 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 AL023803.3-201ENST00000615559 522 ntBASIC23.55■■□□□ 1.36
CHMP4BQ9H444 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 AC034236.2-201ENST00000606662 1610 ntBASIC23.55■■□□□ 1.36
CHMP4BQ9H444 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP4BQ9H444 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 SNORA78-201ENST00000459373 127 ntBASIC23.54■■□□□ 1.36
CHMP4BQ9H444 C2orf69P3-201ENST00000565542 1120 ntBASIC23.54■■□□□ 1.36
CHMP4BQ9H444 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 MIR4497-201ENST00000583208 89 ntBASIC23.54■■□□□ 1.36
CHMP4BQ9H444 MIR3180-5-201ENST00000583743 153 ntBASIC23.54■■□□□ 1.36
CHMP4BQ9H444 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP4BQ9H444 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP4BQ9H444 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 AC116562.4-202ENST00000641738 218 ntBASIC23.52■■□□□ 1.36
CHMP4BQ9H444 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 AL162741.1-201ENST00000565563 1558 ntBASIC23.52■■□□□ 1.36
CHMP4BQ9H444 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms