Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC010653.2-201ENST00000623505 997 ntBASIC17.32■□□□□ 0.36
UBQLN3Q9H347 AC092865.7-201ENST00000641832 219 ntBASIC17.32■□□□□ 0.36
UBQLN3Q9H347 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 FEM1AP3-201ENST00000403722 1741 ntBASIC17.32■□□□□ 0.36
UBQLN3Q9H347 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 AC005521.1-201ENST00000393351 872 ntBASIC17.31■□□□□ 0.36
UBQLN3Q9H347 AC007663.1-201ENST00000438948 1240 ntBASIC17.31■□□□□ 0.36
UBQLN3Q9H347 TSPY17P-201ENST00000450329 467 ntBASIC17.31■□□□□ 0.36
UBQLN3Q9H347 AL353719.1-201ENST00000566847 864 ntBASIC17.31■□□□□ 0.36
UBQLN3Q9H347 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.31■□□□□ 0.36
UBQLN3Q9H347 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 AC090164.3-201ENST00000610780 2143 ntBASIC17.3■□□□□ 0.36
UBQLN3Q9H347 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 RN7SL850P-201ENST00000579959 291 ntBASIC17.3■□□□□ 0.36
UBQLN3Q9H347 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN3Q9H347 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN3Q9H347 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
UBQLN3Q9H347 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBQLN3Q9H347 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBQLN3Q9H347 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN3Q9H347 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN3Q9H347 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms