Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB1BQ9H0U4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 HOXB1-202ENST00000577092 1414 ntBASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 MIR3917-201ENST00000580971 93 ntBASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 AC034236.2-201ENST00000606662 1610 ntBASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB1BQ9H0U4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 AL645929.1-201ENST00000420084 975 ntBASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 AL032819.2-201ENST00000624543 2162 ntBASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB1BQ9H0U4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 AC104390.1-201ENST00000555663 520 ntBASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 AC009065.1-201ENST00000564055 1225 ntBASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB1BQ9H0U4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms