Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXC2Q99958 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXC2Q99958 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
FOXC2Q99958 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXC2Q99958 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXC2Q99958 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXC2Q99958 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXC2Q99958 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXC2Q99958 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXC2Q99958 LINC02084-201ENST00000606069 1096 ntBASIC15.71■□□□□ 0.11
FOXC2Q99958 AC124864.1-201ENST00000623408 392 ntBASIC15.71■□□□□ 0.11
FOXC2Q99958 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXC2Q99958 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXC2Q99958 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXC2Q99958 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXC2Q99958 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXC2Q99958 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXC2Q99958 AC009237.14-201ENST00000609975 1594 ntBASIC15.7■□□□□ 0.1
FOXC2Q99958 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FOXC2Q99958 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 KRT18P23-201ENST00000435622 1283 ntBASIC15.7■□□□□ 0.1
FOXC2Q99958 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXC2Q99958 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.7■□□□□ 0.1
FOXC2Q99958 RPL13AP23-201ENST00000480739 586 ntBASIC15.7■□□□□ 0.1
FOXC2Q99958 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 AC009065.1-201ENST00000564055 1225 ntBASIC15.7■□□□□ 0.1
FOXC2Q99958 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXC2Q99958 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 AL355385.1-201ENST00000606123 409 ntBASIC15.7■□□□□ 0.1
FOXC2Q99958 AC010240.3-201ENST00000607688 395 ntBASIC15.7■□□□□ 0.1
FOXC2Q99958 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXC2Q99958 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
FOXC2Q99958 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXC2Q99958 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
FOXC2Q99958 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 MIR940-201ENST00000401276 94 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
FOXC2Q99958 MINOS1P3-201ENST00000457048 203 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXC2Q99958 RN7SL606P-201ENST00000472779 293 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 AC104390.1-201ENST00000555663 520 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 AC139887.3-201ENST00000568585 713 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXC2Q99958 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 AC243591.1-201ENST00000452967 1364 ntBASIC15.69■□□□□ 0.1
FOXC2Q99958 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXC2Q99958 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXC2Q99958 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXC2Q99958 KRT8P3-201ENST00000519669 1449 ntBASIC15.68■□□□□ 0.1
FOXC2Q99958 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXC2Q99958 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
FOXC2Q99958 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
FOXC2Q99958 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXC2Q99958 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms