Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 RNPS1P1-201ENST00000507437 918 ntBASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 GABARAPL3-202ENST00000624044 1851 ntBASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN4Q96NY8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 AP005901.3-202ENST00000581653 237 ntBASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN4Q96NY8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 MIR1233-2-201ENST00000408138 82 ntBASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 MIR1233-1-201ENST00000408722 82 ntBASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 AL591684.3-201ENST00000605187 298 ntBASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN4Q96NY8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 SLC25A1P1-201ENST00000528351 927 ntBASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 AC092865.5-201ENST00000545435 363 ntBASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
NECTIN4Q96NY8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 AC006333.2-201ENST00000607957 2099 ntBASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN4Q96NY8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms