Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.93■□□□□ 0.3
MS4A3Q96HJ5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 RPS2P55-201ENST00000397318 883 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AP002982.1-201ENST00000492365 877 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AC107956.1-201ENST00000494359 873 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AL109741.3-201ENST00000561748 592 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AF186192.3-201ENST00000583427 947 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AC080188.3-201ENST00000624842 748 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 LINC01465-201ENST00000408887 1940 ntBASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A3Q96HJ5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 AC120498.9-201ENST00000339021 3867 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 AC100757.3-201ENST00000622361 1406 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 RPS2P4-201ENST00000476944 856 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 CBX3P7-201ENST00000532876 502 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 OR6C71P-202ENST00000641886 1107 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 CROCCP3-202ENST00000420820 1947 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 AL390961.4-201ENST00000623958 2535 ntBASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A3Q96HJ5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
MS4A3Q96HJ5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms