Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 AC138028.4-201ENST00000564984 1845 ntBASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 AC080038.1-201ENST00000611274 1154 ntBASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP6Q96FZ7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP6Q96FZ7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 AL355472.2-201ENST00000422958 438 ntBASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP6Q96FZ7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP6Q96FZ7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms