Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 AC142381.2-201ENST00000566120 298 ntBASIC14.25□□□□□ -0.13
SMIM12Q96EX1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM12Q96EX1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.24□□□□□ -0.13
SMIM12Q96EX1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 AC138028.4-201ENST00000564984 1845 ntBASIC14.24□□□□□ -0.13
SMIM12Q96EX1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 AC139713.2-201ENST00000641328 2723 ntBASIC14.24□□□□□ -0.13
SMIM12Q96EX1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM12Q96EX1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 AC046158.3-201ENST00000624947 2558 ntBASIC14.23□□□□□ -0.13
SMIM12Q96EX1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 AL390719.1-204ENST00000412397 1219 ntBASIC14.23□□□□□ -0.13
SMIM12Q96EX1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 AC008694.1-202ENST00000636953 945 ntBASIC14.23□□□□□ -0.13
SMIM12Q96EX1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM12Q96EX1 HEIH-201ENST00000623091 1652 ntBASIC14.23□□□□□ -0.13
SMIM12Q96EX1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMIM12Q96EX1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms