Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC068880.1-201ENST00000507289 2297 ntBASIC18.89■□□□□ 0.61
LRRC39Q96DD0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC39Q96DD0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 AC130371.2-201ENST00000619443 611 ntBASIC18.88■□□□□ 0.61
LRRC39Q96DD0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 AL133373.2-201ENST00000623187 2828 ntBASIC18.88■□□□□ 0.61
LRRC39Q96DD0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 AL109659.2-201ENST00000606809 1674 ntBASIC18.88■□□□□ 0.61
LRRC39Q96DD0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC39Q96DD0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC39Q96DD0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 MYLKP1-201ENST00000509077 1580 ntBASIC18.86■□□□□ 0.61
LRRC39Q96DD0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 RARRES2P10-201ENST00000564312 460 ntBASIC18.86■□□□□ 0.61
LRRC39Q96DD0 AC006058.3-201ENST00000606217 1069 ntBASIC18.86■□□□□ 0.61
LRRC39Q96DD0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LRRC39Q96DD0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 AC008556.1-201ENST00000610908 2040 ntBASIC18.85■□□□□ 0.61
LRRC39Q96DD0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 FAM207BP-201ENST00000447172 505 ntBASIC18.85■□□□□ 0.61
LRRC39Q96DD0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC39Q96DD0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms