Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTHRC1Q96CG8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 AC009947.2-201ENST00000444014 672 ntBASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 AC073508.3-201ENST00000619697 1419 ntBASIC17.3■□□□□ 0.36
CTHRC1Q96CG8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC009113.1-201ENST00000570267 2443 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC090164.3-201ENST00000610780 2143 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC113347.1-201ENST00000413321 391 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC010203.1-204ENST00000548782 407 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC104390.1-201ENST00000555663 520 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC005363.2-201ENST00000618631 242 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC112497.1-201ENST00000624824 639 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC141257.4-201ENST00000634557 245 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 AC136944.6-201ENST00000634818 245 ntBASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.29■□□□□ 0.36
CTHRC1Q96CG8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms