Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 AC145285.3-201ENST00000564603 959 ntBASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 MTDHP3-201ENST00000594186 672 ntBASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 AC140113.2-201ENST00000604370 208 ntBASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM43Q96BQ3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 TEX21P-204ENST00000641479 1693 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 AC098831.1-202ENST00000438821 336 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 IGHV3-22-201ENST00000520721 359 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 AC010327.4-202ENST00000591484 748 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 AP001160.2-201ENST00000596071 487 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 AL356488.2-201ENST00000602755 427 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 AC027601.4-201ENST00000611259 610 ntBASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM43Q96BQ3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 RPSAP43-201ENST00000402237 625 ntBASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM43Q96BQ3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.21■□□□□ 0.83
TRIM43Q96BQ3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms