Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS33AQ96AX1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 RCC2P6-201ENST00000526625 1557 ntBASIC17.97■□□□□ 0.47
VPS33AQ96AX1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 POM121L13P-201ENST00000422362 380 ntBASIC17.97■□□□□ 0.47
VPS33AQ96AX1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 AC069152.1-201ENST00000438030 544 ntBASIC17.97■□□□□ 0.47
VPS33AQ96AX1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 PRKY-204ENST00000533551 1019 ntBASIC17.97■□□□□ 0.47
VPS33AQ96AX1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 AL109923.1-201ENST00000618799 583 ntBASIC17.97■□□□□ 0.47
VPS33AQ96AX1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS33AQ96AX1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.96■□□□□ 0.47
VPS33AQ96AX1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS33AQ96AX1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
VPS33AQ96AX1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
VPS33AQ96AX1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
VPS33AQ96AX1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VPS33AQ96AX1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 AP000997.3-201ENST00000623333 2250 ntBASIC17.95■□□□□ 0.46
VPS33AQ96AX1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.95■□□□□ 0.46
VPS33AQ96AX1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 AC133041.1-202ENST00000642053 222 ntBASIC17.95■□□□□ 0.46
VPS33AQ96AX1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
VPS33AQ96AX1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS33AQ96AX1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms